National Health Laboratory Service is a consumer services company based out of 1 Modderfontein Road, Johannesburg, Gauteng, South Africa.
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Bioformatics Scientist (Fixed Term Contract Ending 30 September 2026)
Engage with NICD users and assist with next-generation sequencing (NGS) data analysis
Perform basic and advanced analysis and interpretation on data produced from next generation sequencing systems (e.g. Illumina, PacBio or Ion torrent platforms) as well as develop, improve, modify, and operate data analysis pipelines
Conduct and initiate research in the area of NGS data analysis
Work closely with researchers and collaborators to generate/provide data analysis reports, project reports and perform custom analysis as requested Participate in training employees or staff with bioinformatics skills and build confidence amongst users to analyze and understand their own data resulting in improved and effective research outcomes
Perform a total Data Quality Management of the facility which involves the implementation and monitoring of systems to ensure accurate and reliable results
Monitor and manage bioinformatics requests or projects to ensure objectives are achieved in terms of turnaround times, cost control, quality and service
Responsible for overseeing and monitoring of software tools and data resources to ensure smooth operation of the sequencing facility
Develop and implement costing model for Bioinformatics solutions
Maintain hardware and software infrastructure
Establish strong collaborative links with experts in the area of bioinformatics.
Minimum requirements and Key Competency
MSc in Bioinformatics or related relevant field/PhD desirable
5 years’ experience with Next-generation sequencing data analysis
Experience with the relevant sequence analysis tools / best practices
Background, or experience in molecular biology or microbiology Experience with working in a Linux/UNIX environment
Strong bioinformatics analysis and scripting experience including proficiency with a scripting language